PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D11G2225
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 423aa    MW: 47662.1 Da    PI: 5.3639
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D11G2225genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.55e-12136175443
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                  +k +rr+++NReAAr+sR+RKka++++Le+   +L +  +
  Gh_D11G2225 136 DKIQRRLAQNREAARKSRLRKKAYVQQLENSRLKLIQLEQ 175
                  689**************************96666655554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-8132179No hitNo description
SMARTSM003384.4E-9133196IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.875135179IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-8137179No hitNo description
CDDcd147084.69E-21137189No hitNo description
PfamPF001703.1E-8137167IPR004827Basic-leucine zipper domain
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
PfamPF141445.7E-29223298IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MATQHLDDNI CREEEGIEAI ETWNVGEQQE LEGDEESKLS IALDINSTCA KVAFVIISKS  60
MNSPTPQFVP SRLSIYEPIH QIGIWGENFK RNGNPNTSTS LIVEVDNKLE NESETTSHEM  120
LAPTNNYEQE ASKPIDKIQR RLAQNREAAR KSRLRKKAYV QQLENSRLKL IQLEQELQRV  180
TQQGLYMGGV LEGSHIGFSG TVNSGIAAFE MEYGRWVDVQ HRQICELRTA LNAHISDIEL  240
RILVKSGMGH YFELFRMKST VAKADVFYVI SGVWKTSAER FFSWIGGFRP SELLKVLVPQ  300
LDPLTEQQIL EVCNLKQSCQ QAEDALSQGM EKLQETVSST VAGGPVAEDS YIPQVATAME  360
KLEALVSFVN QADHLRQETL QQMSRILTTR QAARGLLALG EYFHRLRALS TLWATRPPEP  420
SLP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012492248.10.0PREDICTED: transcription factor TGA1-like isoform X2
SwissprotQ392370.0TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A0D2PEC40.0A0A0D2PEC4_G
STRINGVIT_07s0031g01320.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29762766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.50.0bZIP family protein